No. words: 1803; after pruning: 1763


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.9 (1,1:972)  806  0.12 0.00 0.24  MoSU026F_A07_BQ170165Td01P030F08P005F121F1_063.ab1       11   841 (0)  C MoSU026R_A07_BQ170165Td01P030F08P005F121R1_063.ab1   (0)   962   134 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  406 nodes

 205 str. conn. components

Path
    1    MoSU026F_A07_BQ170165Td01P030F08P005F121F1_063.ab1     1 
  280  C MoSU026R_A07_BQ170165Td01P030F08P005F121R1_063.ab1   695 
  284    MoSU026F_A07_BQ170165Td01P030F08P005F121F1_063.ab1   284 
  304  C MoSU026R_A07_BQ170165Td01P030F08P005F121R1_063.ab1   671 
  308    MoSU026F_A07_BQ170165Td01P030F08P005F121F1_063.ab1   308 
  376  C MoSU026R_A07_BQ170165Td01P030F08P005F121R1_063.ab1   599 
  380    MoSU026F_A07_BQ170165Td01P030F08P005F121F1_063.ab1   380 
  388  C MoSU026R_A07_BQ170165Td01P030F08P005F121R1_063.ab1   587 
  416    MoSU026F_A07_BQ170165Td01P030F08P005F121F1_063.ab1   416 
  432  C MoSU026R_A07_BQ170165Td01P030F08P005F121R1_063.ab1   543 
  544    MoSU026F_A07_BQ170165Td01P030F08P005F121F1_063.ab1   544 
  548  C MoSU026R_A07_BQ170165Td01P030F08P005F121R1_063.ab1   427 
Contig length: old 973, new 974

Contig length: old 974, new 974
New start: 0