No. words: 1675; after pruning: 1635


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.7 (1,1:994)  666  0.29 0.00 0.00  MoSU027F_A01_BQ170165Td01P030G08P005F121F1_015.ab1      245   924 (0)  C MoSU027R_A01_BQ170165Td01P030G08P005F121R1_015.ab1   (0)   751    72 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  334 nodes

 169 str. conn. components

Path
    1    MoSU027F_A01_BQ170165Td01P030G08P005F121F1_015.ab1     1 
  591  C MoSU027R_A01_BQ170165Td01P030G08P005F121R1_015.ab1   405 
  595    MoSU027F_A01_BQ170165Td01P030G08P005F121F1_015.ab1   595 
  623  C MoSU027R_A01_BQ170165Td01P030G08P005F121R1_015.ab1   373 
  631    MoSU027F_A01_BQ170165Td01P030G08P005F121F1_015.ab1   631 
  635  C MoSU027R_A01_BQ170165Td01P030G08P005F121R1_015.ab1   361 
  643    MoSU027F_A01_BQ170165Td01P030G08P005F121F1_015.ab1   643 
  647  C MoSU027R_A01_BQ170165Td01P030G08P005F121R1_015.ab1   349 
Contig length: old 995, new 995

Contig length: old 995, new 995
New start: 0