No. words: 1731; after pruning: 1705


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 15.9 (1,1:973)  732  0.40 0.00 0.00  MoSU026F_B07_BQ170165Td02P030F08P005F121F1_061.ab1       26   780 (0)  C MoSU026R_B07_BQ170165Td02P030F08P005F121R1_061.ab1   (2)   949   195 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1    MoSU026F_B07_BQ170165Td02P030F08P005F121F1_061.ab1     1 
  303  C MoSU026R_B07_BQ170165Td02P030F08P005F121R1_061.ab1   672 
  307    MoSU026F_B07_BQ170165Td02P030F08P005F121F1_061.ab1   307 
  323  C MoSU026R_B07_BQ170165Td02P030F08P005F121R1_061.ab1   652 
  327    MoSU026F_B07_BQ170165Td02P030F08P005F121F1_061.ab1   327 
  399  C MoSU026R_B07_BQ170165Td02P030F08P005F121R1_061.ab1   576 
  403    MoSU026F_B07_BQ170165Td02P030F08P005F121F1_061.ab1   403 
  411  C MoSU026R_B07_BQ170165Td02P030F08P005F121R1_061.ab1   564 
  423    MoSU026F_B07_BQ170165Td02P030F08P005F121F1_061.ab1   423 
  427  C MoSU026R_B07_BQ170165Td02P030F08P005F121R1_061.ab1   548 
Contig length: old 974, new 974

Contig length: old 974, new 974
New start: 0