No. words: 1781; after pruning: 1741


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.1 (1,1:989)  774  0.13 0.13 0.00  MoSU027F_B01_BQ170165Td02P030G08P005F121F1_013.ab1      159   948 (0)  C MoSU027R_B01_BQ170165Td02P030G08P005F121R1_013.ab1   (0)   833    43 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1    MoSU027F_B01_BQ170165Td02P030G08P005F121F1_013.ab1     1 
  438  C MoSU027R_B01_BQ170165Td02P030G08P005F121R1_013.ab1   554 
  530    MoSU027F_B01_BQ170165Td02P030G08P005F121F1_013.ab1   530 
  586  C MoSU027R_B01_BQ170165Td02P030G08P005F121R1_013.ab1   406 
  594    MoSU027F_B01_BQ170165Td02P030G08P005F121F1_013.ab1   594 
  622  C MoSU027R_B01_BQ170165Td02P030G08P005F121R1_013.ab1   370 
Contig length: old 990, new 991

Contig length: old 991, new 991
New start: 0