No. words: 1617; after pruning: 1577


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:990)  615  0.16 0.00 0.00  MoSU027F_D01_BQ170165Td04P030G08P005F121F1_009.ab1      199   824 (0)  C MoSU027R_D01_BQ170165Td04P030G08P005F121R1_009.ab1   (0)   793   168 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1    MoSU027F_D01_BQ170165Td04P030G08P005F121F1_009.ab1     1 
  586  C MoSU027R_D01_BQ170165Td04P030G08P005F121R1_009.ab1   406 
  610    MoSU027F_D01_BQ170165Td04P030G08P005F121F1_009.ab1   610 
  622  C MoSU027R_D01_BQ170165Td04P030G08P005F121R1_009.ab1   370 
Contig length: old 991, new 991

Contig length: old 991, new 991
New start: 0