No. words: 1686; after pruning: 1632


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.3 (1,1:944)  722  0.54 0.00 0.00  MoSU026F_F07_BQ170165Td06P030F08P005F121F1_053.ab1       98   838 (0)  C MoSU026R_F07_BQ170165Td06P030F08P005F121R1_053.ab1   (0)   848   108 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  360 nodes

 182 str. conn. components

Path
    1    MoSU026F_F07_BQ170165Td06P030F08P005F121F1_053.ab1     1 
  313  C MoSU026R_F07_BQ170165Td06P030F08P005F121R1_053.ab1   633 
  317    MoSU026F_F07_BQ170165Td06P030F08P005F121F1_053.ab1   317 
  369  C MoSU026R_F07_BQ170165Td06P030F08P005F121R1_053.ab1   577 
  385    MoSU026F_F07_BQ170165Td06P030F08P005F121F1_053.ab1   385 
  393  C MoSU026R_F07_BQ170165Td06P030F08P005F121R1_053.ab1   553 
  397    MoSU026F_F07_BQ170165Td06P030F08P005F121F1_053.ab1   397 
  420  C MoSU026R_F07_BQ170165Td06P030F08P005F121R1_053.ab1   526 
  428    MoSU026F_F07_BQ170165Td06P030F08P005F121F1_053.ab1   428 
  440  C MoSU026R_F07_BQ170165Td06P030F08P005F121R1_053.ab1   506 
  508    MoSU026F_F07_BQ170165Td06P030F08P005F121F1_053.ab1   508 
  516  C MoSU026R_F07_BQ170165Td06P030F08P005F121R1_053.ab1   430 
  536    MoSU026F_F07_BQ170165Td06P030F08P005F121F1_053.ab1   536 
  540  C MoSU026R_F07_BQ170165Td06P030F08P005F121R1_053.ab1   406 
Contig length: old 945, new 945

Contig length: old 945, new 945
New start: 0