No. words: 1810; after pruning: 1770


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 17.5 (1,1:990)  787  0.49 0.25 0.00  MoSU027F_F01_BQ170165Td06P030G08P005F121F1_005.ab1      160   975 (2)  C MoSU027R_F01_BQ170165Td06P030G08P005F121R1_005.ab1   (0)   833    16 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  396 nodes

 200 str. conn. components

Path
    1    MoSU027F_F01_BQ170165Td06P030G08P005F121F1_005.ab1     1 
  556  C MoSU027R_F01_BQ170165Td06P030G08P005F121R1_005.ab1   437 
Contig length: old 991, new 992

Contig length: old 992, new 992
New start: 0