No. words: 1671; after pruning: 1631


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.9 (1,1:906)  752  0.13 0.00 0.00  MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1       76   839 (0)  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   (0)   832    69 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  380 nodes

 192 str. conn. components

Path
    1    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1     1 
  295  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   613 
  299    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1   299 
  311  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   597 
  315    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1   315 
  331  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   577 
  335    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1   335 
  343  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   565 
  371    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1   371 
  379  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   529 
  403    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1   403 
  419  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   489 
  427    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1   427 
  439  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   469 
  467    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1   467 
  475  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   433 
  515    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1   515 
  519  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   389 
  571    MoSU026F_H07_BQ170165Td08P030F08P005F121F1_049.ab1   571 
  579  C MoSU026R_H07_BQ170165Td08P030F08P005F121R1_049.ab1   329 
Contig length: old 907, new 907

Contig length: old 907, new 907
New start: 0