No. words: 1713; after pruning: 1673


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:993)  707  0.14 0.00 0.00  MoSU027F_H01_BQ170165Td08P030G08P005F121F1_001.ab1      207   925 (0)  C MoSU027R_H01_BQ170165Td08P030G08P005F121R1_001.ab1   (0)   788    70 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  358 nodes

 181 str. conn. components

Path
    1    MoSU027F_H01_BQ170165Td08P030G08P005F121F1_001.ab1     1 
  446  C MoSU027R_H01_BQ170165Td08P030G08P005F121R1_001.ab1   549 
  494    MoSU027F_H01_BQ170165Td08P030G08P005F121F1_001.ab1   494 
  626  C MoSU027R_H01_BQ170165Td08P030G08P005F121R1_001.ab1   369 
Contig length: old 994, new 994

Contig length: old 994, new 994
New start: 0