No. words: 1815; after pruning: 1775


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 16.3 (1,1:979)  798  0.24 0.00 0.36  MoSU026F_A08_BQ170165Td09P030F08P005F121F1_064.ab1       10   841 (0)  C MoSU026R_A08_BQ170165Td09P030F08P005F121R1_064.ab1   (5)   969   141 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1    MoSU026F_A08_BQ170165Td09P030F08P005F121F1_064.ab1     1 
  389  C MoSU026R_A08_BQ170165Td09P030F08P005F121R1_064.ab1   593 
  393    MoSU026F_A08_BQ170165Td09P030F08P005F121F1_064.ab1   393 
  397  C MoSU026R_A08_BQ170165Td09P030F08P005F121R1_064.ab1   585 
  429    MoSU026F_A08_BQ170165Td09P030F08P005F121F1_064.ab1   429 
  437  C MoSU026R_A08_BQ170165Td09P030F08P005F121R1_064.ab1   545 
  449    MoSU026F_A08_BQ170165Td09P030F08P005F121F1_064.ab1   449 
  457  C MoSU026R_A08_BQ170165Td09P030F08P005F121R1_064.ab1   525 
  525    MoSU026F_A08_BQ170165Td09P030F08P005F121F1_064.ab1   525 
  529  C MoSU026R_A08_BQ170165Td09P030F08P005F121R1_064.ab1   453 
  557    MoSU026F_A08_BQ170165Td09P030F08P005F121F1_064.ab1   557 
  561  C MoSU026R_A08_BQ170165Td09P030F08P005F121R1_064.ab1   421 
  605    MoSU026F_A08_BQ170165Td09P030F08P005F121F1_064.ab1   605 
  609  C MoSU026R_A08_BQ170165Td09P030F08P005F121R1_064.ab1   373 
Contig length: old 980, new 981

Contig length: old 981, new 981
New start: 0