No. words: 1838; after pruning: 1812


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 17.3 (1,1:982)  819  0.24 0.00 0.12  MoSU026F_B08_BQ170165Td10P030F08P005F121F1_062.ab1       16   859 (0)  C MoSU026R_B08_BQ170165Td10P030F08P005F121R1_062.ab1   (12)   967   125 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  416 nodes

 210 str. conn. components

Path
    1    MoSU026F_B08_BQ170165Td10P030F08P005F121F1_062.ab1     1 
  334  C MoSU026R_B08_BQ170165Td10P030F08P005F121R1_062.ab1   650 
  338    MoSU026F_B08_BQ170165Td10P030F08P005F121F1_062.ab1   338 
  366  C MoSU026R_B08_BQ170165Td10P030F08P005F121R1_062.ab1   618 
  370    MoSU026F_B08_BQ170165Td10P030F08P005F121F1_062.ab1   370 
  390  C MoSU026R_B08_BQ170165Td10P030F08P005F121R1_062.ab1   594 
  394    MoSU026F_B08_BQ170165Td10P030F08P005F121F1_062.ab1   394 
  402  C MoSU026R_B08_BQ170165Td10P030F08P005F121R1_062.ab1   582 
  434    MoSU026F_B08_BQ170165Td10P030F08P005F121F1_062.ab1   434 
  438  C MoSU026R_B08_BQ170165Td10P030F08P005F121R1_062.ab1   546 
  450    MoSU026F_B08_BQ170165Td10P030F08P005F121F1_062.ab1   450 
  458  C MoSU026R_B08_BQ170165Td10P030F08P005F121R1_062.ab1   526 
Contig length: old 983, new 983

Contig length: old 983, new 983
New start: 0