No. words: 1784; after pruning: 1758


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:1294)  480  0.00 0.20 0.00  MoSU010F_B01_BQ170165Tu02P005F06P005F121F1_013.ab1      480   967 (0)  C MoSU010R_B01_BQ170165Tu02P005F06P005F121R1_013.ab1   (0)   817   329 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1    MoSU010F_B01_BQ170165Tu02P005F06P005F121F1_013.ab1     1 
  647  C MoSU010R_B01_BQ170165Tu02P005F06P005F121R1_013.ab1   650 
  655    MoSU010F_B01_BQ170165Tu02P005F06P005F121F1_013.ab1   655 
  659  C MoSU010R_B01_BQ170165Tu02P005F06P005F121R1_013.ab1   638 
  663    MoSU010F_B01_BQ170165Tu02P005F06P005F121F1_013.ab1   663 
  667  C MoSU010R_B01_BQ170165Tu02P005F06P005F121R1_013.ab1   630 
  671    MoSU010F_B01_BQ170165Tu02P005F06P005F121F1_013.ab1   671 
  679  C MoSU010R_B01_BQ170165Tu02P005F06P005F121R1_013.ab1   618 
  715    MoSU010F_B01_BQ170165Tu02P005F06P005F121F1_013.ab1   715 
  719  C MoSU010R_B01_BQ170165Tu02P005F06P005F121R1_013.ab1   578 
  735    MoSU010F_B01_BQ170165Tu02P005F06P005F121F1_013.ab1   735 
  739  C MoSU010R_B01_BQ170165Tu02P005F06P005F121R1_013.ab1   558 
Contig length: old 1295, new 1296

Contig length: old 1296, new 1296
New start: 0