No. words: 1460; after pruning: 1434


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.8 (1,1:685)  666  0.00 0.15 0.00  MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1        1   686 (45)  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1   (42)   687     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1   729 
   83    MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1    40 
   99  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1   631 
  107    MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1    64 
  127  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1   603 
  139    MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1    96 
  295  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1   435 
  391    MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1   348 
  519  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1   211 
  555    MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1   512 
  575  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1   155 
  603    MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1   560 
  623  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1   107 
  635    MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1   592 
  643  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1    87 
  647    MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1   604 
  659  C MoSU024R_D05_CD373508As02P019E03P019E091R1_041.ab1    71 
  703    MoSU024F_D05_CD373508As02P019E03P019E091F1_041.ab1   660 
Contig length: old 774, new 774

Contig length: old 774, new 774
New start: 0