No. words: 1406; after pruning: 1380


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:537)  523  0.00 0.19 0.00  MoSU024F_G05_CD373508Ld01P019E03P019E091F1_035.ab1        1   538 (154)  C MoSU024R_G05_CD373508Ld01P019E03P019E091R1_035.ab1   (175)   539     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C MoSU024R_G05_CD373508Ld01P019E03P019E091R1_035.ab1   714 
  509    MoSU024F_G05_CD373508Ld01P019E03P019E091F1_035.ab1   333 
Contig length: old 868, new 868

Contig length: old 868, new 868
New start: 0