No. words: 1310; after pruning: 1284


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:542)  510  0.74 0.18 0.18  MoSU024F_E06_CD373508Ld07P019E03P019E091F1_040.ab1        1   543 (155)  C MoSU024R_E06_CD373508Ld07P019E03P019E091R1_040.ab1   (69)   543     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C MoSU024R_E06_CD373508Ld07P019E03P019E091R1_040.ab1   612 
   82    MoSU024F_E06_CD373508Ld07P019E03P019E091F1_040.ab1    12 
   97  C MoSU024R_E06_CD373508Ld07P019E03P019E091R1_040.ab1   516 
  105    MoSU024F_E06_CD373508Ld07P019E03P019E091F1_040.ab1    35 
Contig length: old 767, new 768

Contig length: old 768, new 768
New start: 0