No. words: 1071; after pruning: 1045


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.6 (1,1:502)  447  2.98 0.00 0.00  MoSU024F_A05_CD373508Tu01P019E03P019E091F1_047.ab1        1   503 (42)  C MoSU024R_A05_CD373508Tu01P019E03P019E091R1_047.ab1   (23)   503     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C MoSU024R_A05_CD373508Tu01P019E03P019E091R1_047.ab1   526 
   36    MoSU024F_A05_CD373508Tu01P019E03P019E091F1_047.ab1    13 
   52  C MoSU024R_A05_CD373508Tu01P019E03P019E091R1_047.ab1   475 
   68    MoSU024F_A05_CD373508Tu01P019E03P019E091F1_047.ab1    45 
  355  C MoSU024R_A05_CD373508Tu01P019E03P019E091R1_047.ab1   172 
  359    MoSU024F_A05_CD373508Tu01P019E03P019E091F1_047.ab1   336 
Contig length: old 568, new 568

Contig length: old 568, new 568
New start: 0 
S Change at: 30; seg lengths: entry 3, contig 3