No. words: 950; after pruning: 924


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.8 (1,1:321)  312  0.00 0.31 0.31  MoSU024F_E04_CD452447Ld07P019D03P019D091F1_024.ab1        1   322 (143)  C MoSU024R_E04_CD452447Ld07P019D03P019D091R1_024.ab1   (163)   322     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1  C MoSU024R_E04_CD452447Ld07P019D03P019D091R1_024.ab1   485 
  374    MoSU024F_E04_CD452447Ld07P019D03P019D091F1_024.ab1   210 
Contig length: old 628, new 629

Contig length: old 629, new 629
New start: 0