No. words: 1245; after pruning: 1219


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:623)  408  3.02 0.00 0.00  MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1      161   624 (157)  C MoSU022R_B12_CD454041Ld03P005H06P005H121R1_094.ab1   (0)   464     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1    MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1     1 
  262  C MoSU022R_B12_CD454041Ld03P005H06P005H121R1_094.ab1   363 
  266    MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1   266 
  322  C MoSU022R_B12_CD454041Ld03P005H06P005H121R1_094.ab1   303 
  330    MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1   330 
  346  C MoSU022R_B12_CD454041Ld03P005H06P005H121R1_094.ab1   279 
  350    MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1   350 
  366  C MoSU022R_B12_CD454041Ld03P005H06P005H121R1_094.ab1   259 
  378    MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1   378 
  390  C MoSU022R_B12_CD454041Ld03P005H06P005H121R1_094.ab1   235 
  398    MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1   398 
  494  C MoSU022R_B12_CD454041Ld03P005H06P005H121R1_094.ab1   131 
  502    MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1   502 
  506  C MoSU022R_B12_CD454041Ld03P005H06P005H121R1_094.ab1   119 
  510    MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1   510 
  565  C MoSU022R_B12_CD454041Ld03P005H06P005H121R1_094.ab1    60 
  569    MoSU022F_B12_CD454041Ld03P005H06P005H121F1_094.ab1   569 
Contig length: old 781, new 781

Contig length: old 781, new 781
New start: 0