No. words: 1561; after pruning: 1535


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:630)  608  0.00 0.00 0.16  MoSU022F_E12_CD454041Ld06P005H06P005H121F1_088.ab1        1   631 (143)  C MoSU022R_E12_CD454041Ld06P005H06P005H121R1_088.ab1   (157)   630     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C MoSU022R_E12_CD454041Ld06P005H06P005H121R1_088.ab1   787 
  181    MoSU022F_E12_CD454041Ld06P005H06P005H121F1_088.ab1    24 
  185  C MoSU022R_E12_CD454041Ld06P005H06P005H121R1_088.ab1   603 
  189    MoSU022F_E12_CD454041Ld06P005H06P005H121F1_088.ab1    32 
  205  C MoSU022R_E12_CD454041Ld06P005H06P005H121R1_088.ab1   583 
  289    MoSU022F_E12_CD454041Ld06P005H06P005H121F1_088.ab1   132 
  293  C MoSU022R_E12_CD454041Ld06P005H06P005H121R1_088.ab1   495 
  665    MoSU022F_E12_CD454041Ld06P005H06P005H121F1_088.ab1   508 
  677  C MoSU022R_E12_CD454041Ld06P005H06P005H121R1_088.ab1   111 
  681    MoSU022F_E12_CD454041Ld06P005H06P005H121F1_088.ab1   524 
  697  C MoSU022R_E12_CD454041Ld06P005H06P005H121R1_088.ab1    91 
  733    MoSU022F_E12_CD454041Ld06P005H06P005H121F1_088.ab1   576 
  741  C MoSU022R_E12_CD454041Ld06P005H06P005H121R1_088.ab1    47 
  749    MoSU022F_E12_CD454041Ld06P005H06P005H121F1_088.ab1   592 
  757  C MoSU022R_E12_CD454041Ld06P005H06P005H121R1_088.ab1    31 
  761    MoSU022F_E12_CD454041Ld06P005H06P005H121F1_088.ab1   604 
Contig length: old 930, new 931

Contig length: old 931, new 931
New start: 0