No. words: 1323; after pruning: 1297


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:612)  594  0.00 0.16 0.00  MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1        1   613 (46)  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1   (50)   614     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1   664 
   54    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1     4 
   62  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1   603 
   72    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1    21 
   92  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1   573 
  112    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1    61 
  128  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1   537 
  140    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1    89 
  144  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1   521 
  176    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1   125 
  188  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1   477 
  496    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1   445 
  500  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1   165 
  556    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1   505 
  564  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1   101 
  572    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1   521 
  576  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1    89 
  608    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1   557 
  612  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1    53 
  624    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1   573 
  628  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1    37 
  644    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1   593 
  648  C MoSU022R_B11_CD454041Tu02P005H06P005H121R1_093.ab1    17 
  652    MoSU022F_B11_CD454041Tu02P005H06P005H121F1_093.ab1   601 
Contig length: old 710, new 710

Contig length: old 710, new 710
New start: 0