No. words: 762; after pruning: 736


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.0 (1,1:360)  217  0.00 0.00 0.00  MoSU004F_B08_CD454870Ld04P005E06E121F1_061.ab1        1   228 (0)  C MoSU004R_B08_CD454870Ld04P005E06E121R1_061.ab1   (173)   361   134 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  116 nodes

 60 str. conn. components

Path
    1  C MoSU004R_B08_CD454870Ld04P005E06E121R1_061.ab1   534 
Contig length: old 534, new 534

Contig length: old 534, new 534
New start: 0