No. words: 1069; after pruning: 1043


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:385)  369  0.00 0.00 0.00  MoSU004F_G08_CD454870Ld09P005E06E121F1_056.ab1        1   386 (155)  C MoSU004R_G08_CD454870Ld09P005E06E121R1_056.ab1   (142)   386     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  194 nodes

 99 str. conn. components

Path
    1  C MoSU004R_G08_CD454870Ld09P005E06E121R1_056.ab1   528 
  298    MoSU004F_G08_CD454870Ld09P005E06E121F1_056.ab1   156 
  306  C MoSU004R_G08_CD454870Ld09P005E06E121R1_056.ab1   223 
  322    MoSU004F_G08_CD454870Ld09P005E06E121F1_056.ab1   180 
  390  C MoSU004R_G08_CD454870Ld09P005E06E121R1_056.ab1   139 
  394    MoSU004F_G08_CD454870Ld09P005E06E121F1_056.ab1   252 
  426  C MoSU004R_G08_CD454870Ld09P005E06E121R1_056.ab1   103 
  430    MoSU004F_G08_CD454870Ld09P005E06E121F1_056.ab1   288 
  454  C MoSU004R_G08_CD454870Ld09P005E06E121R1_056.ab1    75 
  458    MoSU004F_G08_CD454870Ld09P005E06E121F1_056.ab1   316 
  462  C MoSU004R_G08_CD454870Ld09P005E06E121R1_056.ab1    67 
  466    MoSU004F_G08_CD454870Ld09P005E06E121F1_056.ab1   324 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0