No. words: 617; after pruning: 591


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 4.6 (1,1:259)  240  0.40 0.00 0.00  MoSU029F_E10_CD454870Sn25P024G03P005E121F1_072.ab1        8   260 (53)  C MoSU029R_E10_CD454870Sn25P024G03P005E121R1_072.ab1   (51)   253     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  126 nodes

 65 str. conn. components

Path
    1  C MoSU029R_E10_CD454870Sn25P024G03P005E121R1_072.ab1   304 
   79    MoSU029F_E10_CD454870Sn25P024G03P005E121F1_072.ab1    35 
   83  C MoSU029R_E10_CD454870Sn25P024G03P005E121R1_072.ab1   222 
  103    MoSU029F_E10_CD454870Sn25P024G03P005E121F1_072.ab1    59 
  119  C MoSU029R_E10_CD454870Sn25P024G03P005E121R1_072.ab1   186 
  175    MoSU029F_E10_CD454870Sn25P024G03P005E121F1_072.ab1   131 
  199  C MoSU029R_E10_CD454870Sn25P024G03P005E121R1_072.ab1   106 
  219    MoSU029F_E10_CD454870Sn25P024G03P005E121F1_072.ab1   175 
Contig length: old 357, new 357

Contig length: old 357, new 357
New start: 0