No. words: 599; after pruning: 573


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 4.5 (1,1:251)  237  0.00 0.00 0.40  MoSU031F_A12_CD454870Sn26P024H03P005E121F1_096.ab1        1   250 (42)  C MoSU031R_A12_CD454870Sn26P024H03P005E121R1_096.ab1   (56)   251     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  124 nodes

 64 str. conn. components

Path
    1  C MoSU031R_A12_CD454870Sn26P024H03P005E121R1_096.ab1   307 
  124    MoSU031F_A12_CD454870Sn26P024H03P005E121F1_096.ab1    68 
  128  C MoSU031R_A12_CD454870Sn26P024H03P005E121R1_096.ab1   180 
  164    MoSU031F_A12_CD454870Sn26P024H03P005E121F1_096.ab1   108 
Contig length: old 347, new 348

Contig length: old 348, new 348
New start: 0