No. words: 577; after pruning: 551


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.7 (1,1:239)  224  0.00 0.00 0.83  MoSU031F_D10_CD454870Ta14P024H03P005E121F1_074.ab1        1   241 (47)  C MoSU031R_D10_CD454870Ta14P024H03P005E121R1_074.ab1   (50)   239     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  118 nodes

 61 str. conn. components

Path
    1  C MoSU031R_D10_CD454870Ta14P024H03P005E121R1_074.ab1   289 
   78    MoSU031F_D10_CD454870Ta14P024H03P005E121F1_074.ab1    28 
   82  C MoSU031R_D10_CD454870Ta14P024H03P005E121R1_074.ab1   208 
  106    MoSU031F_D10_CD454870Ta14P024H03P005E121F1_074.ab1    56 
  122  C MoSU031R_D10_CD454870Ta14P024H03P005E121R1_074.ab1   168 
  134    MoSU031F_D10_CD454870Ta14P024H03P005E121F1_074.ab1    84 
  142  C MoSU031R_D10_CD454870Ta14P024H03P005E121R1_074.ab1   148 
  154    MoSU031F_D10_CD454870Ta14P024H03P005E121F1_074.ab1   104 
Contig length: old 337, new 338

Contig length: old 338, new 338
New start: 0