No. words: 656; after pruning: 630


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.5 (1,1:289)  272  0.00 0.00 0.34  MoSU031F_A03_CD454870Ta17P005E06P024D041F1_031.ab1        1   290 (31)  C MoSU031R_A03_CD454870Ta17P005E06P024D041R1_031.ab1   (46)   289     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  144 nodes

 74 str. conn. components

Path
    1  C MoSU031R_A03_CD454870Ta17P005E06P024D041R1_031.ab1   335 
  214    MoSU031F_A03_CD454870Ta17P005E06P024D041F1_031.ab1   168 
  230  C MoSU031R_A03_CD454870Ta17P005E06P024D041R1_031.ab1   106 
  254    MoSU031F_A03_CD454870Ta17P005E06P024D041F1_031.ab1   208 
Contig length: old 366, new 367

Contig length: old 367, new 367
New start: 0