No. words: 603; after pruning: 577


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 4.2 (1,1:255)  232  0.00 0.00 0.80  MoSU031F_A11_CD454870Ta19P024H03P005E121F1_095.ab1        8   257 (47)  C MoSU031R_A11_CD454870Ta19P024H03P005E121R1_095.ab1   (51)   248     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  122 nodes

 63 str. conn. components

Path
    1  C MoSU031R_A11_CD454870Ta19P024H03P005E121R1_095.ab1   299 
   99    MoSU031F_A11_CD454870Ta19P024H03P005E121F1_095.ab1    55 
  131  C MoSU031R_A11_CD454870Ta19P024H03P005E121R1_095.ab1   169 
  167    MoSU031F_A11_CD454870Ta19P024H03P005E121F1_095.ab1   123 
  171  C MoSU031R_A11_CD454870Ta19P024H03P005E121R1_095.ab1   129 
  183    MoSU031F_A11_CD454870Ta19P024H03P005E121F1_095.ab1   139 
  191  C MoSU031R_A11_CD454870Ta19P024H03P005E121R1_095.ab1   109 
  195    MoSU031F_A11_CD454870Ta19P024H03P005E121F1_095.ab1   151 
  211  C MoSU031R_A11_CD454870Ta19P024H03P005E121R1_095.ab1    89 
  227    MoSU031F_A11_CD454870Ta19P024H03P005E121F1_095.ab1   183 
  235  C MoSU031R_A11_CD454870Ta19P024H03P005E121R1_095.ab1    65 
  243    MoSU031F_A11_CD454870Ta19P024H03P005E121F1_095.ab1   199 
Contig length: old 347, new 348

Contig length: old 348, new 348
New start: 0