No. words: 615; after pruning: 589


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.6 (1,1:255)  241  0.00 0.39 0.00  MoSU031F_E06_CD454870Ta21P024G03P005E121F1_040.ab1        1   256 (55)  C MoSU031R_E06_CD454870Ta21P024G03P005E121R1_040.ab1   (47)   257     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  128 nodes

 66 str. conn. components

Path
    1  C MoSU031R_E06_CD454870Ta21P024G03P005E121R1_040.ab1   304 
  104    MoSU031F_E06_CD454870Ta21P024G03P005E121F1_040.ab1    56 
  120  C MoSU031R_E06_CD454870Ta21P024G03P005E121R1_040.ab1   185 
  188    MoSU031F_E06_CD454870Ta21P024G03P005E121F1_040.ab1   140 
  204  C MoSU031R_E06_CD454870Ta21P024G03P005E121R1_040.ab1   101 
  208    MoSU031F_E06_CD454870Ta21P024G03P005E121F1_040.ab1   160 
  228  C MoSU031R_E06_CD454870Ta21P024G03P005E121R1_040.ab1    77 
  236    MoSU031F_E06_CD454870Ta21P024G03P005E121F1_040.ab1   188 
Contig length: old 359, new 359

Contig length: old 359, new 359
New start: 0