No. words: 620; after pruning: 594


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.0 (1,1:257)  241  0.00 0.78 0.00  MoSU031F_D11_CD454870Ta22P024H03P005E121F1_089.ab1        1   257 (62)  C MoSU031R_D11_CD454870Ta22P024H03P005E121R1_089.ab1   (42)   259     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  124 nodes

 64 str. conn. components

Path
    1  C MoSU031R_D11_CD454870Ta22P024H03P005E121R1_089.ab1   301 
   88    MoSU031F_D11_CD454870Ta22P024H03P005E121F1_089.ab1    44 
   92  C MoSU031R_D11_CD454870Ta22P024H03P005E121R1_089.ab1   210 
  116    MoSU031F_D11_CD454870Ta22P024H03P005E121F1_089.ab1    72 
  132  C MoSU031R_D11_CD454870Ta22P024H03P005E121R1_089.ab1   170 
  184    MoSU031F_D11_CD454870Ta22P024H03P005E121F1_089.ab1   140 
  192  C MoSU031R_D11_CD454870Ta22P024H03P005E121R1_089.ab1   110 
  196    MoSU031F_D11_CD454870Ta22P024H03P005E121F1_089.ab1   152 
  212  C MoSU031R_D11_CD454870Ta22P024H03P005E121R1_089.ab1    90 
  224    MoSU031F_D11_CD454870Ta22P024H03P005E121F1_089.ab1   180 
  236  C MoSU031R_D11_CD454870Ta22P024H03P005E121R1_089.ab1    66 
  264    MoSU031F_D11_CD454870Ta22P024H03P005E121F1_089.ab1   220 
Contig length: old 362, new 363

Contig length: old 363, new 363
New start: 0