No. words: 614; after pruning: 588


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.4 (1,1:265)  247  0.00 0.00 0.75  MoSU031F_E04_CD454870Td05P024G03P005E121F1_024.ab1        1   267 (45)  C MoSU031R_E04_CD454870Td05P024G03P005E121R1_024.ab1   (37)   265     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  130 nodes

 67 str. conn. components

Path
    1  C MoSU031R_E04_CD454870Td05P024G03P005E121R1_024.ab1   302 
   97    MoSU031F_E04_CD454870Td05P024G03P005E121F1_024.ab1    60 
  109  C MoSU031R_E04_CD454870Td05P024G03P005E121R1_024.ab1   194 
  165    MoSU031F_E04_CD454870Td05P024G03P005E121F1_024.ab1   128 
Contig length: old 348, new 349

Contig length: old 349, new 349
New start: 0