No. words: 621; after pruning: 595


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.6 (1,1:262)  243  0.00 0.00 0.76  MoSU031F_G04_CD454870Td07P024G03P005E121F1_020.ab1        1   264 (48)  C MoSU031R_G04_CD454870Td07P024G03P005E121R1_020.ab1   (47)   262     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  128 nodes

 66 str. conn. components

Path
    1  C MoSU031R_G04_CD454870Td07P024G03P005E121R1_020.ab1   309 
   79    MoSU031F_G04_CD454870Td07P024G03P005E121F1_020.ab1    32 
   83  C MoSU031R_G04_CD454870Td07P024G03P005E121R1_020.ab1   227 
   91    MoSU031F_G04_CD454870Td07P024G03P005E121F1_020.ab1    44 
  103  C MoSU031R_G04_CD454870Td07P024G03P005E121R1_020.ab1   207 
  107    MoSU031F_G04_CD454870Td07P024G03P005E121F1_020.ab1    60 
  119  C MoSU031R_G04_CD454870Td07P024G03P005E121R1_020.ab1   191 
  175    MoSU031F_G04_CD454870Td07P024G03P005E121F1_020.ab1   128 
  183  C MoSU031R_G04_CD454870Td07P024G03P005E121R1_020.ab1   127 
  187    MoSU031F_G04_CD454870Td07P024G03P005E121F1_020.ab1   140 
  199  C MoSU031R_G04_CD454870Td07P024G03P005E121R1_020.ab1   111 
  215    MoSU031F_G04_CD454870Td07P024G03P005E121F1_020.ab1   168 
Contig length: old 358, new 359

Contig length: old 359, new 359
New start: 0