No. words: 1380; after pruning: 1354


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:770)  592  0.66 0.00 0.00  UCD002F_F03_BE312718AT01P001B02B081F1_027.ab1      144   752 (0)  C UCD002R_F03_BE312718AT01P001B02B081R1_027.ab1   (0)   628    20 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1    UCD002F_F03_BE312718AT01P001B02B081F1_027.ab1     1 
  383  C UCD002R_F03_BE312718AT01P001B02B081R1_027.ab1   389 
  405    UCD002F_F03_BE312718AT01P001B02B081F1_027.ab1   405 
  437  C UCD002R_F03_BE312718AT01P001B02B081R1_027.ab1   335 
  449    UCD002F_F03_BE312718AT01P001B02B081F1_027.ab1   449 
  457  C UCD002R_F03_BE312718AT01P001B02B081R1_027.ab1   315 
Contig length: old 771, new 771

Contig length: old 771, new 771
New start: 0