No. words: 1303; after pruning: 1277


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 11.1 (1,1:777)  515  0.19 0.00 0.00  UCD002F_G03_BE312718AT02P001B02B081F1_020.ab1      191   712 (0)  C UCD002R_G03_BE312718AT02P001B02B081R1_020.ab1   (3)   588    67 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1    UCD002F_G03_BE312718AT02P001B02B081F1_020.ab1     1 
  401  C UCD002R_G03_BE312718AT02P001B02B081R1_020.ab1   378 
  405    UCD002F_G03_BE312718AT02P001B02B081F1_020.ab1   405 
  449  C UCD002R_G03_BE312718AT02P001B02B081R1_020.ab1   330 
  465    UCD002F_G03_BE312718AT02P001B02B081F1_020.ab1   465 
  469  C UCD002R_G03_BE312718AT02P001B02B081R1_020.ab1   310 
Contig length: old 778, new 778

Contig length: old 778, new 778
New start: 0