No. words: 479; after pruning: 453


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.1 (1,1:244)  171  0.54 0.54 0.54  UCD014F_B06_BE398302Ta18P012D02P025C041F1_046.ab1        1   185 (0)  C UCD014R_B06_BE398302Ta18P012D02P025C041R1_046.ab1   (49)   245    61 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  84 nodes

 44 str. conn. components

Path
    1  C UCD014R_B06_BE398302Ta18P012D02P025C041R1_046.ab1   294 
Contig length: old 294, new 294

Contig length: old 294, new 294
New start: 0