No. words: 1798; after pruning: 1772


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.7 (1,1:957)  819  0.00 0.00 0.00  UCD017F_C02_BE399200LD05P028D01D071F1_012.ab1      114   953 (0)  C UCD017R_C02_BE399200LD05P028D01D071R1_012.ab1   (0)   845     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  422 nodes

 213 str. conn. components

Path
    1    UCD017F_C02_BE399200LD05P028D01D071F1_012.ab1     1 
  549  C UCD017R_C02_BE399200LD05P028D01D071R1_012.ab1   410 
  557    UCD017F_C02_BE399200LD05P028D01D071F1_012.ab1   557 
  577  C UCD017R_C02_BE399200LD05P028D01D071R1_012.ab1   382 
Contig length: old 958, new 958

Contig length: old 958, new 958
New start: 0