No. words: 1776; after pruning: 1750


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.4 (1,1:981)  763  0.00 0.13 0.13  UCD017F_H02_BE399200LD10P028D01D071F1_002.ab1      126   919 (0)  C UCD017R_H02_BE399200LD10P028D01D071R1_002.ab1   (0)   857    64 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1    UCD017F_H02_BE399200LD10P028D01D071F1_002.ab1     1 
  425  C UCD017R_H02_BE399200LD10P028D01D071R1_002.ab1   558 
Contig length: old 982, new 982

Contig length: old 982, new 982
New start: 0