No. words: 772; after pruning: 746


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.2 -0.2 (1,1:718)   37  7.55 0.00 0.00  UCD034F_C09_BE399200Sn27P028D01P036G091F1_075.ab1      248   300 (0)  C UCD034R_C09_BE399200Sn27P028D01P036G091R1_075.ab1   (0)   472   420 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.2       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  18 nodes

 11 str. conn. components

Path
    1    UCD034F_C09_BE399200Sn27P028D01P036G091F1_075.ab1     1 
  251  C UCD034R_C09_BE399200Sn27P028D01P036G091R1_075.ab1   469 
  268    UCD034F_C09_BE399200Sn27P028D01P036G091F1_075.ab1   268 
  276  C UCD034R_C09_BE399200Sn27P028D01P036G091R1_075.ab1   444 
Contig length: old 719, new 719

Contig length: old 719, new 719
New start: 0