No. words: 1777; after pruning: 1751


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.3 (1,1:878)  817  0.48 0.00 0.00  UCD004F_E02_BE403597LD07P012A02A081F1_008.ab1       50   879 (68)  C UCD004R_E02_BE403597LD07P012A02A081R1_008.ab1   (0)   830     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1    UCD004F_E02_BE403597LD07P012A02A081F1_008.ab1     1 
  577  C UCD004R_E02_BE403597LD07P012A02A081R1_008.ab1   303 
  876    UCD004F_E02_BE403597LD07P012A02A081F1_008.ab1   876 
Contig length: old 947, new 947

Contig length: old 947, new 947
New start: 0