No. words: 1519; after pruning: 1493


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.2 (1,1:713)  701  0.28 0.00 0.14  UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1        1   714 (41)  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   (51)   713     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   764 
   62    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1    11 
   90  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   675 
   94    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1    43 
   98  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   667 
  106    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1    55 
  143  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   622 
  147    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1    96 
  163  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   602 
  175    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   124 
  179  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   586 
  187    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   136 
  203  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   562 
  207    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   156 
  227  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   538 
  231    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   180 
  235  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   530 
  243    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   192 
  291  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   474 
  319    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   268 
  347  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   418 
  351    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   300 
  371  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   394 
  379    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   328 
  391  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   374 
  403    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   352 
  415  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   350 
  443    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   392 
  447  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   318 
  459    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   408 
  499  C UCD026R_F09_BE403597Sn24P025B03P036H011R1_069.ab1   266 
  747    UCD026F_F09_BE403597Sn24P025B03P036H011F1_069.ab1   696 
Contig length: old 805, new 806

Contig length: old 806, new 806
New start: 0