No. words: 1619; after pruning: 1593


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 16.6 (1,1:785)  771  0.25 0.00 0.13  UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1        2   786 (44)  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   (5)   784     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   789 
    9    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1     5 
   35  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   755 
   39    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1    35 
   43  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   747 
   51    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1    47 
   63  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   727 
   83    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1    79 
   87  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   703 
   98    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1    94 
  138  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   652 
  142    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   138 
  146  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   644 
  150    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   146 
  154  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   636 
  166    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   162 
  186  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   604 
  194    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   190 
  198  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   592 
  202    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   198 
  206  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   584 
  226    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   222 
  230  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   560 
  242    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   238 
  254  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   536 
  262    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   258 
  278  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   512 
  290    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   286 
  298  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   492 
  438    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   434 
  442  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   348 
  498    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   494 
  510  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   280 
  622    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   618 
  630  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   160 
  678    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   674 
  690  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1   100 
  698    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   694 
  710  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1    80 
  746    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   742 
  750  C UCD026R_H03_BE403597Sn24P025H02P036H011R1_017.ab1    40 
  774    UCD026F_H03_BE403597Sn24P025H02P036H011F1_017.ab1   770 
Contig length: old 833, new 834

Contig length: old 834, new 834
New start: 0 
S Change at: 27; seg lengths: entry 1, contig 1