No. words: 1499; after pruning: 1473


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.6 (1,1:717)  707  0.42 0.00 0.00  UCD026F_G09_BE403597Sn25P025B03P036H011F1_067.ab1        1   718 (52)  C UCD026R_G09_BE403597Sn25P025B03P036H011R1_067.ab1   (11)   718     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C UCD026R_G09_BE403597Sn25P025B03P036H011R1_067.ab1   729 
   15    UCD026F_G09_BE403597Sn25P025B03P036H011F1_067.ab1     4 
   51  C UCD026R_G09_BE403597Sn25P025B03P036H011R1_067.ab1   679 
   55    UCD026F_G09_BE403597Sn25P025B03P036H011F1_067.ab1    44 
  134  C UCD026R_G09_BE403597Sn25P025B03P036H011R1_067.ab1   596 
  138    UCD026F_G09_BE403597Sn25P025B03P036H011F1_067.ab1   127 
  202  C UCD026R_G09_BE403597Sn25P025B03P036H011R1_067.ab1   528 
  206    UCD026F_G09_BE403597Sn25P025B03P036H011F1_067.ab1   195 
  482  C UCD026R_G09_BE403597Sn25P025B03P036H011R1_067.ab1   248 
  630    UCD026F_G09_BE403597Sn25P025B03P036H011F1_067.ab1   619 
  634  C UCD026R_G09_BE403597Sn25P025B03P036H011R1_067.ab1    96 
  642    UCD026F_G09_BE403597Sn25P025B03P036H011F1_067.ab1   631 
  646  C UCD026R_G09_BE403597Sn25P025B03P036H011R1_067.ab1    84 
  722    UCD026F_G09_BE403597Sn25P025B03P036H011F1_067.ab1   711 
Contig length: old 781, new 781

Contig length: old 781, new 781
New start: 0