No. words: 1530; after pruning: 1504


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:711)  687  0.42 0.28 0.14  UCD026F_C10_BE403597Sn29P025B03P036H011F1_076.ab1        1   711 (54)  C UCD026R_C10_BE403597Sn29P025B03P036H011R1_076.ab1   (53)   712     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1  C UCD026R_C10_BE403597Sn29P025B03P036H011R1_076.ab1   765 
   64    UCD026F_C10_BE403597Sn29P025B03P036H011F1_076.ab1    10 
  239  C UCD026R_C10_BE403597Sn29P025B03P036H011R1_076.ab1   527 
  243    UCD026F_C10_BE403597Sn29P025B03P036H011F1_076.ab1   189 
  251  C UCD026R_C10_BE403597Sn29P025B03P036H011R1_076.ab1   515 
  259    UCD026F_C10_BE403597Sn29P025B03P036H011F1_076.ab1   205 
  415  C UCD026R_C10_BE403597Sn29P025B03P036H011R1_076.ab1   351 
  419    UCD026F_C10_BE403597Sn29P025B03P036H011F1_076.ab1   365 
  491  C UCD026R_C10_BE403597Sn29P025B03P036H011R1_076.ab1   275 
  499    UCD026F_C10_BE403597Sn29P025B03P036H011F1_076.ab1   445 
  515  C UCD026R_C10_BE403597Sn29P025B03P036H011R1_076.ab1   251 
  595    UCD026F_C10_BE403597Sn29P025B03P036H011F1_076.ab1   541 
  611  C UCD026R_C10_BE403597Sn29P025B03P036H011R1_076.ab1   155 
  671    UCD026F_C10_BE403597Sn29P025B03P036H011F1_076.ab1   617 
  679  C UCD026R_C10_BE403597Sn29P025B03P036H011R1_076.ab1    87 
  759    UCD026F_C10_BE403597Sn29P025B03P036H011F1_076.ab1   705 
Contig length: old 818, new 819

Contig length: old 819, new 818
New start: 0 
D Change at: 72; seg lengths: entry 0, contig 1