No. words: 1484; after pruning: 1458


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.6 (1,1:671)  661  0.15 0.00 0.15  UCD026F_D10_BE403597Sn30P025B03P036H011F1_074.ab1        1   672 (48)  C UCD026R_D10_BE403597Sn30P025B03P036H011R1_074.ab1   (93)   671     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  332 nodes

 168 str. conn. components

Path
    1  C UCD026R_D10_BE403597Sn30P025B03P036H011R1_074.ab1   764 
   97    UCD026F_D10_BE403597Sn30P025B03P036H011F1_074.ab1     4 
  141  C UCD026R_D10_BE403597Sn30P025B03P036H011R1_074.ab1   624 
  145    UCD026F_D10_BE403597Sn30P025B03P036H011F1_074.ab1    52 
  249  C UCD026R_D10_BE403597Sn30P025B03P036H011R1_074.ab1   516 
  261    UCD026F_D10_BE403597Sn30P025B03P036H011F1_074.ab1   168 
  453  C UCD026R_D10_BE403597Sn30P025B03P036H011R1_074.ab1   312 
  457    UCD026F_D10_BE403597Sn30P025B03P036H011F1_074.ab1   364 
  481  C UCD026R_D10_BE403597Sn30P025B03P036H011R1_074.ab1   284 
  485    UCD026F_D10_BE403597Sn30P025B03P036H011F1_074.ab1   392 
  489  C UCD026R_D10_BE403597Sn30P025B03P036H011R1_074.ab1   276 
  755    UCD026F_D10_BE403597Sn30P025B03P036H011F1_074.ab1   662 
Contig length: old 812, new 813

Contig length: old 813, new 813
New start: 0