No. words: 1601; after pruning: 1575


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.3 (1,1:749)  732  0.67 0.00 0.00  UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1        1   750 (60)  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   (41)   750     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  360 nodes

 182 str. conn. components

Path
    1  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   791 
   53    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1    12 
   57  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   735 
  121    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1    80 
  125  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   667 
  129    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1    88 
  141  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   651 
  145    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   104 
  157  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   635 
  189    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   148 
  205  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   587 
  213    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   172 
  217  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   575 
  221    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   180 
  225  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   567 
  233    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   192 
  237  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   555 
  269    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   228 
  277  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   515 
  285    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   244 
  293  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   499 
  481    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   440 
  485  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   307 
  517    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   476 
  525  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1   267 
  717    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   676 
  771  C UCD026R_B04_BE403597Sn30P025H02P036H011R1_030.ab1    21 
  779    UCD026F_B04_BE403597Sn30P025H02P036H011F1_030.ab1   738 
Contig length: old 851, new 851

Contig length: old 851, new 851
New start: 0