No. words: 1110; after pruning: 1084


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.3 (1,1:452)  414  2.65 0.00 0.00  UCD026F_G07_BE403597Sn31P025A03P036H011F1_051.ab1        1   453 (101)  C UCD026R_G07_BE403597Sn31P025A03P036H011R1_051.ab1   (103)   453     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1  C UCD026R_G07_BE403597Sn31P025A03P036H011R1_051.ab1   556 
  180    UCD026F_G07_BE403597Sn31P025A03P036H011F1_051.ab1    77 
  184  C UCD026R_G07_BE403597Sn31P025A03P036H011R1_051.ab1   373 
  546    UCD026F_G07_BE403597Sn31P025A03P036H011F1_051.ab1   443 
Contig length: old 657, new 657

Contig length: old 657, new 657
New start: 0