No. words: 1264; after pruning: 1238


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.5 (1,1:802)  450  0.44 0.00 0.00  UCD004F_B01_BE403597TU02P012A02A081F1_013.ab1      166   624 (2)  C UCD004R_B01_BE403597TU02P012A02A081R1_013.ab1   (0)   638   180 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1    UCD004F_B01_BE403597TU02P012A02A081F1_013.ab1     1 
  329  C UCD004R_B01_BE403597TU02P012A02A081R1_013.ab1   475 
Contig length: old 803, new 803

Contig length: old 803, new 803
New start: 0