No. words: 1411; after pruning: 1385


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:717)  628  0.00 0.00 0.16  UCD026F_B08_BE403597Ta12P025B03P036H011F1_062.ab1       83   719 (56)  C UCD026R_B08_BE403597Ta12P025B03P036H011R1_062.ab1   (0)   636     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1    UCD026F_B08_BE403597Ta12P025B03P036H011F1_062.ab1     1 
  262  C UCD026R_B08_BE403597Ta12P025B03P036H011R1_062.ab1   457 
  270    UCD026F_B08_BE403597Ta12P025B03P036H011F1_062.ab1   270 
  358  C UCD026R_B08_BE403597Ta12P025B03P036H011R1_062.ab1   361 
  362    UCD026F_B08_BE403597Ta12P025B03P036H011F1_062.ab1   362 
  366  C UCD026R_B08_BE403597Ta12P025B03P036H011R1_062.ab1   353 
  370    UCD026F_B08_BE403597Ta12P025B03P036H011F1_062.ab1   370 
  374  C UCD026R_B08_BE403597Ta12P025B03P036H011R1_062.ab1   345 
  410    UCD026F_B08_BE403597Ta12P025B03P036H011F1_062.ab1   410 
  422  C UCD026R_B08_BE403597Ta12P025B03P036H011R1_062.ab1   297 
  434    UCD026F_B08_BE403597Ta12P025B03P036H011F1_062.ab1   434 
  438  C UCD026R_B08_BE403597Ta12P025B03P036H011R1_062.ab1   281 
  715    UCD026F_B08_BE403597Ta12P025B03P036H011F1_062.ab1   716 
Contig length: old 775, new 774

Contig length: old 774, new 774
New start: 0