No. words: 1596; after pruning: 1570


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:732)  700  1.36 0.00 0.00  UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1        1   733 (93)  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   (37)   733     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   770 
   41    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1     4 
   45  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   726 
  129    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1    92 
  133  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   638 
  137    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   100 
  165  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   606 
  201    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   164 
  213  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   558 
  221    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   184 
  225  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   546 
  277    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   240 
  281  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   490 
  433    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   396 
  445  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   326 
  505    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   468 
  541  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   230 
  569    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   532 
  573  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   198 
  581    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   544 
  585  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   186 
  621    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   584 
  629  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   142 
  633    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   596 
  641  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   130 
  645    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   608 
  669  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1   102 
  697    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   660 
  701  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1    70 
  709    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   672 
  713  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1    58 
  725    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   688 
  750  C UCD026R_D02_BE403597Ta12P025H02P036H011R1_010.ab1    21 
  758    UCD026F_D02_BE403597Ta12P025H02P036H011F1_010.ab1   721 
Contig length: old 863, new 863

Contig length: old 863, new 863
New start: 0