No. words: 1611; after pruning: 1585


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:775)  744  1.03 0.00 0.13  UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1        1   776 (20)  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   (40)   775     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   815 
  120    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1    80 
  134  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   682 
  138    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1    98 
  166  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   650 
  202    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   162 
  214  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   602 
  222    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   182 
  234  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   582 
  242    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   202 
  246  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   570 
  274    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   234 
  286  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   530 
  294    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   254 
  306  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   510 
  314    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   274 
  318  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   498 
  322    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   282 
  326  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   490 
  490    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   450 
  494  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   322 
  530    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   490 
  542  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   274 
  546    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   506 
  550  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   266 
  630    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   590 
  634  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   182 
  650    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   610 
  658  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   158 
  690    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   650 
  698  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   118 
  702    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   662 
  706  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1   110 
  714    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   674 
  722  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1    94 
  726    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   686 
  749  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1    67 
  757    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   717 
  781  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1    35 
  789    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   749 
  793  C UCD026R_E02_BE403597Ta13P025H02P036H011R1_008.ab1    23 
  797    UCD026F_E02_BE403597Ta13P025H02P036H011F1_008.ab1   757 
Contig length: old 835, new 836

Contig length: old 836, new 836
New start: 0