No. words: 1391; after pruning: 1365


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:704)  616  0.16 0.00 0.00  UCD026F_G08_BE403597Ta17P025B03P036H011F1_052.ab1       82   705 (62)  C UCD026R_G08_BE403597Ta17P025B03P036H011R1_052.ab1   (0)   624     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1    UCD026F_G08_BE403597Ta17P025B03P036H011F1_052.ab1     1 
  468  C UCD026R_G08_BE403597Ta17P025B03P036H011R1_052.ab1   238 
  508    UCD026F_G08_BE403597Ta17P025B03P036H011F1_052.ab1   508 
  512  C UCD026R_G08_BE403597Ta17P025B03P036H011R1_052.ab1   194 
  528    UCD026F_G08_BE403597Ta17P025B03P036H011F1_052.ab1   528 
  532  C UCD026R_G08_BE403597Ta17P025B03P036H011R1_052.ab1   174 
  580    UCD026F_G08_BE403597Ta17P025B03P036H011F1_052.ab1   580 
  584  C UCD026R_G08_BE403597Ta17P025B03P036H011R1_052.ab1   122 
  628    UCD026F_G08_BE403597Ta17P025B03P036H011F1_052.ab1   628 
  632  C UCD026R_G08_BE403597Ta17P025B03P036H011R1_052.ab1    74 
  700    UCD026F_G08_BE403597Ta17P025B03P036H011F1_052.ab1   700 
Contig length: old 767, new 767

Contig length: old 767, new 767
New start: 0